Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903497.1_cds_XP_016453588.1_47698
CDS Infomation

[gene=LOC107777931] [db_xref=GeneID:107777931] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016453588.1] [location=complement(join(130337..130923,131028..131956,132139..132452))] [gbkey=CDS]
Sequence

ATGCCTGAGGCACCAAAAACAGCTGAATACAGTGCTGTTGCAGAAAACAACAAGAAAGTT
CTTCAGTTCATTGAAGAGGTGACAACCAACGCCGATGAGGTCCAAAAGAGAGTTCTTGCT
GAAATTCTGTCTCAAAATGCTCATGTTGAATACTTGCATCGCCATGATCTTAATGGTCAT
ACTGACCGAGACACGTTCAAGAAAATCATGCCTGTTATCACCTACGAGGATATTCAGTCT
GATATTACTCGTATTGCCAATGGTGATAAATCTCCTATCCTCTGCTCTCAACCCATCTCT
GAGTTTTTGACAAGTTCCGGGACATCAGGAGGGGAAAGAAAACTGATGCCAACCATTGAG
GAAGAACTTGTGAGGAGATCAAAGCTCTACAGCCTTCTAATGCCTGTGATGAGCCAATTT
GTTCCAGACCTTGAAAAAGGCAAAGGAATGTACTTTTTGTTCATAAAATCTGAGGCTAAG
ACACCAGGGGGATTACCAGCTCGTCCTGTATTAACAAGTTATTATAAGAGCCCCCATTTC
AAGAACAGGCGTCCTGACCCTTACACAAACTATACCAGCCCAAATGAAACGATTCTCTGC
TCAGATTCTTACCAAAGTATGTATTCTCAAATGCTTTGTGGCCTCTGCCAAAACAAAGAA
GTCCTCCGTGTTGGGGCAGTCTTTGCCTCAGGCTTTATCCGTGCTATCCGTTTCTTGGAA
AAGCACTGGTCTCTTCTTTGTCACGATATTAGAACTGGAACCATTAACTCCCAAATTACT
GATCCTTCAGTGAGAGAGGCAGTGATGAAAATCCTGAAACCTGATAATAAGTTAGCTGAT
TTTATTGAGGTTGAATGCAGCAAAAAATCATGGCAAGGGATTATCACTAGGTTGTGGCCT
AATACTAAATATATTGATGTTATTGTGACTGGAACCATGTCACAGTATATACCCACTCTC
GATTACTATAGCAATGGCCTCCCTCTTGTCTGCACCATGTATGCTTCCTCGGAATGCTAC
TTTGGTGTCAACCTTAATCCCCTTTGCAAGCCCAGTGAAGTTGCTTACACACTTATTCCC
ACCATGGGTTATTTTGAGTTCTTGCCTGTTCACAGAAATAATGGTGTCACTAATTCAATC
TCCATGCCTAAATCACTAAATGAGAAAGAGCAGCAAGAATTGGTGGATTTAGTTGATGTC
AAGATTGGCCAGGAGTATGAACTTGTTGTCACCACATATGCTGGACTCTACAGGTATAGG
GTGGGTGATGTGCTTCGGGTTGCTGGATTTAAGAACAACGCTCCTCAATTCAACTTTATC
TGCCGGAAAAATGTGGTGTTAAGCATTGATGCAGACAAGACAGATGAGGTAGAGCTACAA
AATGCGGTCAAAAATGCAGTGAGCCATTTGATGCCATTTGATGCACATGTGATTGAGTAC
ACTAGCTACGCTGATACAACCACAATTCCAGGGCACTATGTCCTATTCTGGGAGCTGAAT
GTGAATGGCTCAACCCCAGTTCCTCCATCAGTTTTTGAAGATTGTTGCCTCACTATTGAG
GAGTCCCTTAACAGCGTTTACCGCCAGGGTCGTGCATCGGACAAATCCATTGGCCCACTG
GAAATCAAGATTGTGGAAAATGGGACTTTTGACAAGCTCATGGACTATGCCATTAGCTTA
GGTGCTTCAATAAATCAGTACAAGACACCCCGATGCGTCAAATTTGCACCCATTGTTGAG
CTTCTGAATTCGAGAGTGGTGTCTAGCTACTTCAGCCCCAAATGCCCAAAATGGGTTCCT
GGCCTCAAGCAATGGAACAACATGAACTGA

Peptide Sequence

PEP ID

XP_016453588.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MPEAPKTAEYSAVAENNKKVLQFIEEVTTNADEVQKRVLAEILSQNAHVEYLHRHDLNGH
TDRDTFKKIMPVITYEDIQSDITRIANGDKSPILCSQPISEFLTSSGTSGGERKLMPTIE
EELVRRSKLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLPARPVLTSYYKSPHF
KNRRPDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQNKEVLRVGAVFASGFIRAIRFLE
KHWSLLCHDIRTGTINSQITDPSVREAVMKILKPDNKLADFIEVECSKKSWQGIITRLWP
NTKYIDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIP
TMGYFEFLPVHRNNGVTNSISMPKSLNEKEQQELVDLVDVKIGQEYELVVTTYAGLYRYR
VGDVLRVAGFKNNAPQFNFICRKNVVLSIDADKTDEVELQNAVKNAVSHLMPFDAHVIEY
TSYADTTTIPGHYVLFWELNVNGSTPVPPSVFEDCCLTIEESLNSVYRQGRASDKSIGPL
EIKIVENGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRVVSSYFSPKCPKWVP
GLKQWNNMN

Transcript Sequence

Gene sequence data has not been registered.